PyOTIC’s documentation¶
PyOTIC is a framework written in Python to
- investigate, analyze and process time-dependent data sets, as they occur in optical tweezers experiments, and
- calibrate optical tweezers by power spectral density analysis.
PyOTIC is shipped with two, mostly independent packages, pyoti and pyotc.
Quick installation¶
You can install PyOTIC simply by using pip on the command line
$ pip install pyotc
PyOTIC’s objectives¶
This is coming soon.
PyOTI is written in Python 3.4 and works well with Jupyter Notebook.
User guide¶
Installation¶
PyOTI usage¶
- The structure and components of PyOTI
- Import the PyOTI package
- Create an Experiment
- Create a Record to read in recorded data
- Create a Calibration to calibrate data
- Create a View to select the data of relevance
- Get a Record or a View by their names
- Retrieve data from a View or a Record
- Create a Modification to correct the data
- Get a Modification by its name
- Traces - configuration file, alias names, color and labels
- TODO list
